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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs142808087 chr6:28326294 GCAGAACCCA/G 2.4E-7 211 16.43 13.6 9.77 KM Plot
KIRP rs142813579 chr10:63472215 C/A 0 214 18.02 6.2 3.38 KM Plot
KIRP rs142965311 chr6:27989252 C/T 4.74E-7 213 16.43 16.43 9.77 KM Plot
KIRP rs143056992 chr15:24727995 G/A 6.81E-7 212 15.88 19.27 9.77 KM Plot
KIRP rs143235735 chr14:59893761 TCTAA/T 0.000126 212 16.43 15.07 6.63 KM Plot
KIRP rs143430169 chr11:34917836 A/G 4.21E-12 213 17.13 12.6 5.57 KM Plot
KIRP rs143618681 chr6:28293408 G/GC 2.33E-7 213 16.45 12.8 9.77 KM Plot
KIRP rs143634575 chr11:34782972 G/C 0 212 16.43 16.43 3.83 KM Plot
KIRP rs143672206 chr14:59913524 C/CT 0.000127 211 16.43 16.53 6.63 KM Plot
KIRP rs143681192 chr11:8520890 G/C 0.000466 214 16.43 17.2 4.82 KM Plot
KIRP rs143681852 chr15:24763857 T/C 7.77E-7 210 15.2 19.27 9.77 KM Plot
KIRP rs143731003 chr22:18087899 T/A 4.24E-5 214 16.43 20.27 10.55 KM Plot
KIRP rs143778051 chr15:24509033 GTA/G 0.000103 205 17.02 14.8 10.23 KM Plot
KIRP rs143782858 chr14:59865329 TGGTCTAAAACCTTGA/T 0.000111 213 16.43 16.53 6.63 KM Plot
KIRP rs143783147 chr15:24504897 T/C 2.13E-5 210 16.97 15.07 8.73 KM Plot